We report scaling results on the world's largest supercomputer of our recently developed Billions-Body Molecular Dynamics (BBMD) package, which was especially designed for massively parallel simulations of the short-range atomic dynamics in structural glasses and amorphous materials. The code was able to scale up to 72 racks of an IBM BlueGene/P, with a measured 89% efficiency for a system with 100 billion particles. The code speed, with 0.13. s per iteration in the case of 1 billion particles, paves the way to the study of billion-body structural glasses with a resolution increase of two orders of magnitude with respect to the largest simulation ever reported. We demonstrate the effectiveness of our code by studying the liquid-glass transition of an exceptionally large system made by a binary mixture of 1 billion particles. © 2012.

Molecular dynamics beyonds the limits: Massive scaling on 72 racks of a BlueGene/P and supercooled glass dynamics of a 1 billion particles system / N., Allsopp; Ruocco, Giancarlo; A., Fratalocchi. - In: JOURNAL OF COMPUTATIONAL PHYSICS. - ISSN 0021-9991. - 231:8(2012), pp. 3432-3445. [10.1016/j.jcp.2012.01.019]

Molecular dynamics beyonds the limits: Massive scaling on 72 racks of a BlueGene/P and supercooled glass dynamics of a 1 billion particles system

RUOCCO, Giancarlo;
2012

Abstract

We report scaling results on the world's largest supercomputer of our recently developed Billions-Body Molecular Dynamics (BBMD) package, which was especially designed for massively parallel simulations of the short-range atomic dynamics in structural glasses and amorphous materials. The code was able to scale up to 72 racks of an IBM BlueGene/P, with a measured 89% efficiency for a system with 100 billion particles. The code speed, with 0.13. s per iteration in the case of 1 billion particles, paves the way to the study of billion-body structural glasses with a resolution increase of two orders of magnitude with respect to the largest simulation ever reported. We demonstrate the effectiveness of our code by studying the liquid-glass transition of an exceptionally large system made by a binary mixture of 1 billion particles. © 2012.
2012
thermodynamics of glasses; large scale parallel computing; supercooled liquids; molecular dynamics
01 Pubblicazione su rivista::01a Articolo in rivista
Molecular dynamics beyonds the limits: Massive scaling on 72 racks of a BlueGene/P and supercooled glass dynamics of a 1 billion particles system / N., Allsopp; Ruocco, Giancarlo; A., Fratalocchi. - In: JOURNAL OF COMPUTATIONAL PHYSICS. - ISSN 0021-9991. - 231:8(2012), pp. 3432-3445. [10.1016/j.jcp.2012.01.019]
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/645297
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