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Using the ImmunoChip custom genotyping array, we analyzed 14,498 subjects with multiple sclerosis and 24,091 healthy controls for 161,311 autosomal variants and identified 135 potentially associated regions (P < 1.0 x 10(-4)). In a replication phase, we combined these data with previous genome-wide association study (GWAS) data from an independent 14,802 subjects with multiple sclerosis and 26,703 healthy controls. In these 80,094 individuals of European ancestry, we identified 48 new susceptibility variants (P < 5.0 x 10(-8)), 3 of which we found after conditioning on previously identified variants. Thus, there are now 110 established multiple sclerosis risk variants at 103 discrete loci outside of the major histocompatibility complex. With high-resolution Bayesian fine mapping, we identified five regions where one variant accounted for more than 50% of the posterior probability of association. This study enhances the catalog of multiple sclerosis risk variants and illustrates the value of fine mapping in the resolution of GWAS signals.

Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis / International Multiple Sclerosis Genetics, Consortium; Ashley H., Beecham; Nikolaos A., Patsopoulos; Dionysia K., Xifara; Mary F., Davis; Anu, Kemppinen; Chris, Cotsapas; Tejas S., Shah; Chris, Spencer; David, Booth; An, Goris; Annette, Oturai; Janna, Saarela; Bertrand, Fontaine; Bernhard, Hemmer; Claes, Martin; Frauke, Zipp; Sandra, D'Alfonso; Filippo Martinelli, Boneschi; Bruce, Taylor; Hanne F., Harbo; Ingrid, Kockum; Jan, Hillert; Tomas, Olsson; Maria, Ban; Jorge R., Oksenberg; Rogier, Hintzen; Barcellos Lf 2., Wellcome Trust Case Control Consortium; International Ibd Genetics, Consortium; Cristina, Agliardi; Lars, Alfredsson; Mehdi, Alizadeh; Carl, Anderson; Robert, Andrews; Helle Bach, Søndergaard; Amie, Baker; Gavin, Band; Sergio E., Baranzini; Nadia, Barizzone; Jeffrey, Barrett; Celine, Bellenguez; Laura, Bergamaschi; Luisa, Bernardinelli; Achim, Berthele; Viola, Biberacher; Thomas M. C., Binder; Hannah, Blackburn; Izaura L., Bomfim; Paola, Brambilla; Simon, Broadley; Bruno, Brochet; Lou, Brundin; Dorothea, Buck; Helmut, Butzkueven; Stacy J., Caillier; William, Camu; Wassila, Carpentier; Paola, Cavalla; Elisabeth G., Celius; Irene, Coman; Giancarlo, Comi; Lucia, Corrado; Leentje, Cosemans; Isabelle Cournu, Rebeix; Bruce A. C., Cree; Daniele, Cusi; Vincent, Damotte; Gilles, Defer; Silvia R., Delgado; Panos, Deloukas; A., Di Sapio; Alexander T., Dilthey; Peter, Donnelly; Benedicte, Dubois; Martin, Duddy; Sarah, Edkins; Irina, Elovaara; Federica, Esposito; Nikos, Evangelou; Barnaby, Fiddes; Judith, Field; Andre, Franke; Colin, Freeman; Irene Y., Frohlich; Daniela, Galimberti; Christian, Gieger; Pierre Antoine, Gourraud; Christiane, Graetz; Andrew, Graham; Verena, Grummel; Clara, Guaschino; Athena, Hadjixenofontos; Hakon, Hakonarson; Christopher, Halfpenny; Gillian, Hall; Per, Hall; Anders, Hamsten; James, Harley; Timothy, Harrower; Clive, Hawkins; Garrett, Hellenthal; Charles, Hillier; Jeremy, Hobart; Muni, Hoshi; Sarah E., Hunt; Maja, Jagodic; Ilijas, Jelcic; Angela, Jochim; Brian, Kendall; Allan, Kermode; Trevor, Kilpatrick; Keijo, Koivisto; Ioanna, Konidari; Thomas, Korn; Helena, Kronsbein; Cordelia, Langford; Malin, Larsson; Mark, Lathrop; Christine Lebrun, Frenay; Jeannette Lechner, Scott; Michelle H., Lee; Maurizio A., Leone; Virpi, Leppa; Giuseppe, Liberatore; Benedicte A., Lie; Christina M., Lill; Magdalena, Linden; Jenny, Link; Felix, Luessi; Jan, Lycke; Fabio, Macciardi; Satu, Mannisto; Clara P., Manrique; Roland, Martin; Vittorio, Martinelli; Deborah, Mason; Gordon, Mazibrada; Cristin, Mccabe; Inger Lise, Mero; Julia, Mescheriakova; Loukas, Moutsianas; Kjell Morten, Myhr; Guy, Nagels; Richard, Nicholas; Petra, Nilsson; Fredrik, Piehl; Matti, Pirinen; Sian E., Price; Hong, Quach; Mauri, Reunanen; Wim, Robberecht; Neil P., Robertson; Mariaemma, Rodegher; David, Rog; Salvetti, Marco; Nathalie C., Schnetz Boutaud; Finn, Sellebjerg; Rebecca C., Selter; Catherine, Schaefer; Sandip, Shaunak; Ling, Shen; Simon, Shields; Volker, Siffrin; Mark, Slee; Per Soelberg, Sorensen; Melissa, Sorosina; Mireia, Sospedra; Anne, Spurkland; Amy, Strange; Emilie, Sundqvist; Vincent, Thijs; John, Thorpe; Anna, Ticca; Pentti, Tienari; Cornelia Van, Duijn; Elizabeth M., Visser; Steve, Vucic; Helga, Westerlind; James S., Wiley; Alastair, Wilkins; James F., Wilson; Juliane, Winkelmann; John, Zajicek; Eva, Zindler; Jonathan L., Haines; Margaret A., Pericak Vance; Adrian J., Ivinson; Graeme, Stewart; David, Hafler; Stephen L., Hauser; Alastair, Compston; Gil, Mcvean; Philip De, Jager; Stephen J., Sawcer; Jacob L., Mccauley. - In: NATURE GENETICS. - ISSN 1061-4036. - 45:11(2013), pp. 1353-+. [10.1038/ng.2770]

Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis

SALVETTI, Marco;
2013

Abstract

Using the ImmunoChip custom genotyping array, we analyzed 14,498 subjects with multiple sclerosis and 24,091 healthy controls for 161,311 autosomal variants and identified 135 potentially associated regions (P < 1.0 x 10(-4)). In a replication phase, we combined these data with previous genome-wide association study (GWAS) data from an independent 14,802 subjects with multiple sclerosis and 26,703 healthy controls. In these 80,094 individuals of European ancestry, we identified 48 new susceptibility variants (P < 5.0 x 10(-8)), 3 of which we found after conditioning on previously identified variants. Thus, there are now 110 established multiple sclerosis risk variants at 103 discrete loci outside of the major histocompatibility complex. With high-resolution Bayesian fine mapping, we identified five regions where one variant accounted for more than 50% of the posterior probability of association. This study enhances the catalog of multiple sclerosis risk variants and illustrates the value of fine mapping in the resolution of GWAS signals.
2013
01 Pubblicazione su rivista::01a Articolo in rivista
Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis / International Multiple Sclerosis Genetics, Consortium; Ashley H., Beecham; Nikolaos A., Patsopoulos; Dionysia K., Xifara; Mary F., Davis; Anu, Kemppinen; Chris, Cotsapas; Tejas S., Shah; Chris, Spencer; David, Booth; An, Goris; Annette, Oturai; Janna, Saarela; Bertrand, Fontaine; Bernhard, Hemmer; Claes, Martin; Frauke, Zipp; Sandra, D'Alfonso; Filippo Martinelli, Boneschi; Bruce, Taylor; Hanne F., Harbo; Ingrid, Kockum; Jan, Hillert; Tomas, Olsson; Maria, Ban; Jorge R., Oksenberg; Rogier, Hintzen; Barcellos Lf 2., Wellcome Trust Case Control Consortium; International Ibd Genetics, Consortium; Cristina, Agliardi; Lars, Alfredsson; Mehdi, Alizadeh; Carl, Anderson; Robert, Andrews; Helle Bach, Søndergaard; Amie, Baker; Gavin, Band; Sergio E., Baranzini; Nadia, Barizzone; Jeffrey, Barrett; Celine, Bellenguez; Laura, Bergamaschi; Luisa, Bernardinelli; Achim, Berthele; Viola, Biberacher; Thomas M. C., Binder; Hannah, Blackburn; Izaura L., Bomfim; Paola, Brambilla; Simon, Broadley; Bruno, Brochet; Lou, Brundin; Dorothea, Buck; Helmut, Butzkueven; Stacy J., Caillier; William, Camu; Wassila, Carpentier; Paola, Cavalla; Elisabeth G., Celius; Irene, Coman; Giancarlo, Comi; Lucia, Corrado; Leentje, Cosemans; Isabelle Cournu, Rebeix; Bruce A. C., Cree; Daniele, Cusi; Vincent, Damotte; Gilles, Defer; Silvia R., Delgado; Panos, Deloukas; A., Di Sapio; Alexander T., Dilthey; Peter, Donnelly; Benedicte, Dubois; Martin, Duddy; Sarah, Edkins; Irina, Elovaara; Federica, Esposito; Nikos, Evangelou; Barnaby, Fiddes; Judith, Field; Andre, Franke; Colin, Freeman; Irene Y., Frohlich; Daniela, Galimberti; Christian, Gieger; Pierre Antoine, Gourraud; Christiane, Graetz; Andrew, Graham; Verena, Grummel; Clara, Guaschino; Athena, Hadjixenofontos; Hakon, Hakonarson; Christopher, Halfpenny; Gillian, Hall; Per, Hall; Anders, Hamsten; James, Harley; Timothy, Harrower; Clive, Hawkins; Garrett, Hellenthal; Charles, Hillier; Jeremy, Hobart; Muni, Hoshi; Sarah E., Hunt; Maja, Jagodic; Ilijas, Jelcic; Angela, Jochim; Brian, Kendall; Allan, Kermode; Trevor, Kilpatrick; Keijo, Koivisto; Ioanna, Konidari; Thomas, Korn; Helena, Kronsbein; Cordelia, Langford; Malin, Larsson; Mark, Lathrop; Christine Lebrun, Frenay; Jeannette Lechner, Scott; Michelle H., Lee; Maurizio A., Leone; Virpi, Leppa; Giuseppe, Liberatore; Benedicte A., Lie; Christina M., Lill; Magdalena, Linden; Jenny, Link; Felix, Luessi; Jan, Lycke; Fabio, Macciardi; Satu, Mannisto; Clara P., Manrique; Roland, Martin; Vittorio, Martinelli; Deborah, Mason; Gordon, Mazibrada; Cristin, Mccabe; Inger Lise, Mero; Julia, Mescheriakova; Loukas, Moutsianas; Kjell Morten, Myhr; Guy, Nagels; Richard, Nicholas; Petra, Nilsson; Fredrik, Piehl; Matti, Pirinen; Sian E., Price; Hong, Quach; Mauri, Reunanen; Wim, Robberecht; Neil P., Robertson; Mariaemma, Rodegher; David, Rog; Salvetti, Marco; Nathalie C., Schnetz Boutaud; Finn, Sellebjerg; Rebecca C., Selter; Catherine, Schaefer; Sandip, Shaunak; Ling, Shen; Simon, Shields; Volker, Siffrin; Mark, Slee; Per Soelberg, Sorensen; Melissa, Sorosina; Mireia, Sospedra; Anne, Spurkland; Amy, Strange; Emilie, Sundqvist; Vincent, Thijs; John, Thorpe; Anna, Ticca; Pentti, Tienari; Cornelia Van, Duijn; Elizabeth M., Visser; Steve, Vucic; Helga, Westerlind; James S., Wiley; Alastair, Wilkins; James F., Wilson; Juliane, Winkelmann; John, Zajicek; Eva, Zindler; Jonathan L., Haines; Margaret A., Pericak Vance; Adrian J., Ivinson; Graeme, Stewart; David, Hafler; Stephen L., Hauser; Alastair, Compston; Gil, Mcvean; Philip De, Jager; Stephen J., Sawcer; Jacob L., Mccauley. - In: NATURE GENETICS. - ISSN 1061-4036. - 45:11(2013), pp. 1353-+. [10.1038/ng.2770]
01a Articolo in rivista
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/557110
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