Ancient environmental DNA (aeDNA) data are close to enabling insights into past global-scale biodiversity dynamics at unprecedented taxonomic extent and resolution. However, achieving this potential requires solutions that bridge bioinformatics and paleoecoinformatics. Essential needs include support for dynamic taxonomic inferences, dynamic age inferences, and precise stratigraphic depth. Moreover, aeDNA data are complex and heterogeneous, generated by dispersed researcher networks, with methods advancing rapidly. Hence, expert community governance and curation are essential to building high-value data resources. Immediate recommendations include uploading metabarcoding-based taxonomic inventories into paleoecoinformatic resources, building linkages among open bioinformatic and paleoecoinformatic data resources, harmonizing aeDNA processing workflows, and expanding community data governance. These advances will enable transformative insights into global-scale biodiversity dynamics during large environmental and anthropogenic changes.

Strengthening global-change science by integrating aeDNA with paleoecoinformatics / Williams, John W.; Spanbauer, Trisha L.; Heintzman, Peter D.; Blois, Jessica; Capo, Eric; Goring, Simon J.; Monchamp, Marie-Eve; Parducci, Laura; Von Eggers, Jordan M.. - In: TRENDS IN ECOLOGY & EVOLUTION. - ISSN 0169-5347. - (2023).

Strengthening global-change science by integrating aeDNA with paleoecoinformatics

Laura Parducci;
2023

Abstract

Ancient environmental DNA (aeDNA) data are close to enabling insights into past global-scale biodiversity dynamics at unprecedented taxonomic extent and resolution. However, achieving this potential requires solutions that bridge bioinformatics and paleoecoinformatics. Essential needs include support for dynamic taxonomic inferences, dynamic age inferences, and precise stratigraphic depth. Moreover, aeDNA data are complex and heterogeneous, generated by dispersed researcher networks, with methods advancing rapidly. Hence, expert community governance and curation are essential to building high-value data resources. Immediate recommendations include uploading metabarcoding-based taxonomic inventories into paleoecoinformatic resources, building linkages among open bioinformatic and paleoecoinformatic data resources, harmonizing aeDNA processing workflows, and expanding community data governance. These advances will enable transformative insights into global-scale biodiversity dynamics during large environmental and anthropogenic changes.
2023
ancient environmental DNA; community-curated data resources; global change; ecology; metabarcoding; paleoecoinformatics
01 Pubblicazione su rivista::01a Articolo in rivista
Strengthening global-change science by integrating aeDNA with paleoecoinformatics / Williams, John W.; Spanbauer, Trisha L.; Heintzman, Peter D.; Blois, Jessica; Capo, Eric; Goring, Simon J.; Monchamp, Marie-Eve; Parducci, Laura; Von Eggers, Jordan M.. - In: TRENDS IN ECOLOGY & EVOLUTION. - ISSN 0169-5347. - (2023).
File allegati a questo prodotto
File Dimensione Formato  
Williams_Strengthening-global-change_2023 .pdf

solo gestori archivio

Note: pdf
Tipologia: Versione editoriale (versione pubblicata con il layout dell'editore)
Licenza: Tutti i diritti riservati (All rights reserved)
Dimensione 2.68 MB
Formato Adobe PDF
2.68 MB Adobe PDF   Contatta l'autore

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/1680878
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 6
  • ???jsp.display-item.citation.isi??? 5
social impact