Colorectal and glioblastoma cancer stem-like cells (CSCs) are essential for translational research. Cell line authentication by short tandem repeat (STR) profiling ensures reproducibility of results in oncology research. This technique enables to identify mislabeling or cross-contamination of cell lines. In our study, we provide a reference dataset for a panel of colorectal and glioblastoma CSCs that allows authentication. Each cell line was entered into the cell Line Integrated Molecular Authentication database 2.1 to be compared to the STR profiles of 4485 tumor cell lines. This article also provides clinical data of patients from whom CSCs arose and data on the parent tumor stage and mutations. STR profiles and information of our CSCs are also available in the Cellosaurus database (ExPASy) as identified by unique research resource identifier codes.

Short tandem repeat profiling for the authentication of cancer stem-like cells / Visconti, P.; Parodi, F.; Parodi, B.; Casarino, L.; Romano, P.; Buccarelli, M.; Pallini, R.; D'Alessandris, Q. G.; Montori, A.; Pilozzi, E.; Ricci-Vitiani, L.. - In: INTERNATIONAL JOURNAL OF CANCER. - ISSN 0020-7136. - 148:6(2021), pp. 1489-1498. [10.1002/ijc.33370]

Short tandem repeat profiling for the authentication of cancer stem-like cells

Visconti P.;Parodi B.;Casarino L.;Romano P.;Buccarelli M.;Montori A.;Pilozzi E.;
2021

Abstract

Colorectal and glioblastoma cancer stem-like cells (CSCs) are essential for translational research. Cell line authentication by short tandem repeat (STR) profiling ensures reproducibility of results in oncology research. This technique enables to identify mislabeling or cross-contamination of cell lines. In our study, we provide a reference dataset for a panel of colorectal and glioblastoma CSCs that allows authentication. Each cell line was entered into the cell Line Integrated Molecular Authentication database 2.1 to be compared to the STR profiles of 4485 tumor cell lines. This article also provides clinical data of patients from whom CSCs arose and data on the parent tumor stage and mutations. STR profiles and information of our CSCs are also available in the Cellosaurus database (ExPASy) as identified by unique research resource identifier codes.
2021
cell line authentication; colorectal tumor; glioblastoma; human stem-like cell lines; short tandem repeat profiling; Adult; Aged; Aged, 80 and over; Cell Line Authentication; Colorectal Neoplasms; Datasets as Topic; Female; Gene Expression Profiling; Glioblastoma; Humans; Male; Middle Aged; Cell Line, Tumor; Microsatellite Repeats; Neoplastic Stem Cells
01 Pubblicazione su rivista::01a Articolo in rivista
Short tandem repeat profiling for the authentication of cancer stem-like cells / Visconti, P.; Parodi, F.; Parodi, B.; Casarino, L.; Romano, P.; Buccarelli, M.; Pallini, R.; D'Alessandris, Q. G.; Montori, A.; Pilozzi, E.; Ricci-Vitiani, L.. - In: INTERNATIONAL JOURNAL OF CANCER. - ISSN 0020-7136. - 148:6(2021), pp. 1489-1498. [10.1002/ijc.33370]
File allegati a questo prodotto
File Dimensione Formato  
Visconti_Short_2021.pdf

accesso aperto

Tipologia: Versione editoriale (versione pubblicata con il layout dell'editore)
Licenza: Creative commons
Dimensione 476.09 kB
Formato Adobe PDF
476.09 kB Adobe PDF

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/1568815
Citazioni
  • ???jsp.display-item.citation.pmc??? 9
  • Scopus 11
  • ???jsp.display-item.citation.isi??? 11
social impact