This work proposes a unified framework to leveragebiological information in network propagation-based gene prior-itization algorithms. Preliminary results on breast cancer datashow significant improvements over state-of-the-art baselines,such as the prioritization of genes that are not identified aspotential candidates by interactome-based algorithms, but thatappear to be involved in/or potentially related to breast cancer,according to a functional analysis based on recent literature.

Biological Random Walks: Integrating heterogeneous data in disease gene prioritization / Gentili, Michele; Martini, Leonardo; Petti, M.; Farina, L.; Becchetti, L.. - (2019), pp. 1-8. (Intervento presentato al convegno 16th IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2019 tenutosi a Siena; Italy) [10.1109/CIBCB.2019.8791472].

Biological Random Walks: Integrating heterogeneous data in disease gene prioritization

GENTILI, MICHELE
;
MARTINI, LEONARDO;Petti M.;Farina L.;Becchetti L.
2019

Abstract

This work proposes a unified framework to leveragebiological information in network propagation-based gene prior-itization algorithms. Preliminary results on breast cancer datashow significant improvements over state-of-the-art baselines,such as the prioritization of genes that are not identified aspotential candidates by interactome-based algorithms, but thatappear to be involved in/or potentially related to breast cancer,according to a functional analysis based on recent literature.
2019
16th IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2019
flow propagation algorithms; Gene Ontology; Gene prioritization; interactome; PPI network
04 Pubblicazione in atti di convegno::04b Atto di convegno in volume
Biological Random Walks: Integrating heterogeneous data in disease gene prioritization / Gentili, Michele; Martini, Leonardo; Petti, M.; Farina, L.; Becchetti, L.. - (2019), pp. 1-8. (Intervento presentato al convegno 16th IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2019 tenutosi a Siena; Italy) [10.1109/CIBCB.2019.8791472].
File allegati a questo prodotto
File Dimensione Formato  
Gentili_Biological-Random-Walks_2019.pdf

solo gestori archivio

Tipologia: Versione editoriale (versione pubblicata con il layout dell'editore)
Licenza: Tutti i diritti riservati (All rights reserved)
Dimensione 1.46 MB
Formato Adobe PDF
1.46 MB Adobe PDF   Contatta l'autore

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/1334182
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 6
  • ???jsp.display-item.citation.isi??? 5
social impact