Time-series image capture of in vitro 3D spheroidal cancer models embedded within an extracellular matrix affords examination of spheroid growth and cancer cell invasion. However, a customizable, comprehensive and open source solution for the quantitative analysis of such spheroid images is lacking. Here, the authors describe INSIDIA (INvasion SpheroID ImageJ Analysis), an open-source macro implemented as a customizable software algorithm running on the FIJI platform, that enables high-throughput high-content quantitative analysis of spheroid images (both bright-field gray and fluorescent images) with the output of a range of parameters defining the spheroid “tumor” core and its invasive characteristics.

INSIDIA: A FIJI Macro Delivering High-Throughput and High-Content Spheroid Invasion Analysis / Moriconi, Chiara; Palmieri, Valentina; Di Santo, Riccardo; Tornillo, Giusy; Papi, Massimiliano; Pilkington, Geoff; De Spirito, Marco; Gumbleton, Mark. - In: BIOTECHNOLOGY JOURNAL. - ISSN 1860-6768. - 12:10(2017), p. 1700140. [10.1002/biot.201700140]

INSIDIA: A FIJI Macro Delivering High-Throughput and High-Content Spheroid Invasion Analysis

Moriconi, Chiara;Di Santo, Riccardo;Papi, Massimiliano;
2017

Abstract

Time-series image capture of in vitro 3D spheroidal cancer models embedded within an extracellular matrix affords examination of spheroid growth and cancer cell invasion. However, a customizable, comprehensive and open source solution for the quantitative analysis of such spheroid images is lacking. Here, the authors describe INSIDIA (INvasion SpheroID ImageJ Analysis), an open-source macro implemented as a customizable software algorithm running on the FIJI platform, that enables high-throughput high-content quantitative analysis of spheroid images (both bright-field gray and fluorescent images) with the output of a range of parameters defining the spheroid “tumor” core and its invasive characteristics.
2017
analysis; core; FIJI; invasion; quantitation; spheroid; Aged; Algorithms; Caveolin 1; Cell Line, Tumor; Cell Proliferation; Extracellular Matrix; Gene Knockdown Techniques; High-Throughput Screening Assays; Humans; Image Processing, Computer-Assisted; Male; Software; Spheroids, Cellular; Applied Microbiology and Biotechnology; Molecular Medicine
01 Pubblicazione su rivista::01a Articolo in rivista
INSIDIA: A FIJI Macro Delivering High-Throughput and High-Content Spheroid Invasion Analysis / Moriconi, Chiara; Palmieri, Valentina; Di Santo, Riccardo; Tornillo, Giusy; Papi, Massimiliano; Pilkington, Geoff; De Spirito, Marco; Gumbleton, Mark. - In: BIOTECHNOLOGY JOURNAL. - ISSN 1860-6768. - 12:10(2017), p. 1700140. [10.1002/biot.201700140]
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11573/1113514
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