VIA, ALLEGRA
VIA, ALLEGRA
DIPARTIMENTO DI SCIENZE BIOCHIMICHE "ALESSANDRO ROSSI FANELLI"
3D view of the surface motif associated to the ploop structure: cis and trans cases of convergent evolution. J. Mol. Biol., 303 (4): 455-65.
2000 Via, Allegra; Ferre, F; Brannetti, B; Valencia, A; HELMER CITTERICH, M.
3dLOGO: a web server for the identification, analysis and use of conserved protein substructures
2007 Via, Allegra; D., Peluso; P. F., Gherardini; E., De Rinaldis; Colombo, Teresa; G., Ausiello; M., Helmer Citterich
A framework to assess the quality and impact of bioinformatics training across ELIXIR
2020 Gurwitz, Kim T; Singh Gaur, Prakash; Bellis, Louisa J; Larcombe, Lee; Alloza, Eva; Balint, Balint Laszlo; Botzki, Alexander; Dimec, Jure; Dominguez Del Angel, Victoria; Fernandes, Pedro L; Korpelainen, Eija; Krause, Roland; Kuzak, Mateusz; Le Pera, Loredana; Leskošek, Brane; Lindvall, Jessica M; Marek, Diana; Martinez, Paula A; Muyldermans, Tuur; Nygård, Ståle; Palagi, Patricia M; Peterson, Hedi; Psomopoulos, Fotis; Spiwok, Vojtech; van Gelder, Celia W G; Via, Allegra; Vidak, Marko; Wibberg, Daniel; Morgan, Sarah L; Rustici, Gabriella
A neural strategy for the inference of SH3 domain-peptide interaction specificity
2005 Enrico, Ferraro; Via, Allegra; Gabriele, Ausiello; Manuela Helmer, Citterich
A new pan-European Train-the-Trainer programme for bioinformatics: pilot results on feasibility, utility and sustainability of learning
2019 Via, Allegra; Attwood, Teresa K; Fernandes, Pedro L; Morgan, Sarah L; Schneider, Maria Victoria; Palagi, Patricia M; Rustici, Gabriella; Tractenberg, Rochelle E
A novel structure-based encoding for machine-learning applied to the prediction of SH3 domain specificity.
2006 Ferraro, E; Via, Allegra; Ausiello, G.; HELMER CITTERICH, M.
A prismatic view of protein phosphorylation in health and disease
2015 Via, Allegra; Zanzoni, Andreas
A structural study for the optimisation of functional motifs encoded in protein sequences
2004 Via, Allegra; M., Helmer Citterich
A structure filter for the Eukaryotic Linear Motif Resource
2009 Via, Allegra; Cathryn M., Gould; Christine, Gemund; Toby J., Gibson; Manuela Helmer, Citterich
AI applications in functional genomics
2021 Caudai, Claudia; Galizia, Antonella; Geraci, Filippo; Le Pera, Loredana; Morea, Veronica; Salerno, Emanuele; Via, Allegra; Colombo, Teresa
Analysis of point mutations leading to antibiotic resistance in Streptococcus pneumoniae
2018 Staid, DAVID SASAH; Gerda, Užubalytė; Via, Allegra
Artemether resistance in vitro is linked to mutations in PfATP6 in travellers returning with Plasmodium falciparum infections.
2012 D. R., Pillai; R., Lau; K., Khairnar; Lepore, Rosalba; Via, Allegra; H. M., Staines; S., Krishna
Best practices in bioinformatics training for life scientists
2013 Via, Allegra; Blicher, T; Bongcam Rudloff, E; Brazas, Md; Brooksbank, C; Budd, A; De Las Rivas, J; Dreyer, J; Fernandes, Pl; van Gelder, C; Jacob, J; Jimenez, Rc; Loveland, J; Moran, F; Mulder, N; Nyrönen, T; Rother, K; Schneider, Mv; Attwood, Tk
Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers
2012 M. V., Schneider; P., Walter; M. C., Blatter; J., Watson; M. D., Brazas; K., Rother; A., Budd; Via, Allegra; C. W. G., Van Gelder; J., Jacob; P., Fernandes; T. H., Nyronen; J., De Las Rivas; T., Blicher; R. C., Jimenez; J., Loveland; J., Mcdowall; P., Jones; B. W., Vaughan; R., Lopez; T. K., Attwood; C., Brooksbank
Bioinformatics training: A review of challenges, actions and support requirements
2010 M. V., Schneider; J., Watson; T., Attwood; K., Rother; A., Budd; J., Mcdowall; Via, Allegra; P., Fernandes; T., Nyronen; T., Blicher; P., Jones; M. C., Blatter; J., De Las Rivas; D. P., Judge; W., Van Der Gool; C., Brooksbank
Characterization of the differences in the cyclopiazonic acid binding mode to mammalian and P. Falciparum Ca2+ pumps: a computational study
2015 Di Marino, Daniele; D'Annessa, Ilda; Coletta, Andrea; Via, Allegra; Tramontano, Anna
Course design: considerations for trainers – a professional guide
2020 Via, Allegra; Palagi, Patricia M.; Lindvall, Jessica M.; Tractenberg, Rochelle E.; Attwood, Teresa K.; GOBLET Foundation, The
Data integration in biological research: An overview
2015 Lapatas, Vasileios; Stefanidakis, Michalis; Jimenez, Rafael C.; Via, Allegra; Schneider, Maria Victoria
Development of computational tools for the inference of protein interaction specificity rules and functional annotation using structural information.
2003 Ferre, F; Via, Allegra; Ausiello, G; Brannetti, B; Zanzoni, A.; HELMER CITTERICH, M.
Digestive peptidase evolution in holometabolous insects led to a divergent group of enzymes in Lepidoptera
2015 Dias, Renata O; Via, Allegra; Brandão, Marcelo M; Tramontano, Anna; Silva-Filho, Marcio C
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| 3D view of the surface motif associated to the ploop structure: cis and trans cases of convergent evolution. J. Mol. Biol., 303 (4): 455-65. | 2000 | Via, Allegra; Ferre, F; Brannetti, B; Valencia, A; HELMER CITTERICH, M. | |
| 3dLOGO: a web server for the identification, analysis and use of conserved protein substructures | 2007 | Via, Allegra; D., Peluso; P. F., Gherardini; E., De Rinaldis; Colombo, Teresa; G., Ausiello; M., Helmer Citterich | |
| A framework to assess the quality and impact of bioinformatics training across ELIXIR | 2020 | Gurwitz, Kim T; Singh Gaur, Prakash; Bellis, Louisa J; Larcombe, Lee; Alloza, Eva; Balint, Balint Laszlo; Botzki, Alexander; Dimec, Jure; Dominguez Del Angel, Victoria; Fernandes, Pedro L; Korpelainen, Eija; Krause, Roland; Kuzak, Mateusz; Le Pera, Loredana; Leskošek, Brane; Lindvall, Jessica M; Marek, Diana; Martinez, Paula A; Muyldermans, Tuur; Nygård, Ståle; Palagi, Patricia M; Peterson, Hedi; Psomopoulos, Fotis; Spiwok, Vojtech; van Gelder, Celia W G; Via, Allegra; Vidak, Marko; Wibberg, Daniel; Morgan, Sarah L; Rustici, Gabriella | |
| A neural strategy for the inference of SH3 domain-peptide interaction specificity | 2005 | Enrico, Ferraro; Via, Allegra; Gabriele, Ausiello; Manuela Helmer, Citterich | |
| A new pan-European Train-the-Trainer programme for bioinformatics: pilot results on feasibility, utility and sustainability of learning | 2019 | Via, Allegra; Attwood, Teresa K; Fernandes, Pedro L; Morgan, Sarah L; Schneider, Maria Victoria; Palagi, Patricia M; Rustici, Gabriella; Tractenberg, Rochelle E | |
| A novel structure-based encoding for machine-learning applied to the prediction of SH3 domain specificity. | 2006 | Ferraro, E; Via, Allegra; Ausiello, G.; HELMER CITTERICH, M. | |
| A prismatic view of protein phosphorylation in health and disease | 2015 | Via, Allegra; Zanzoni, Andreas | |
| A structural study for the optimisation of functional motifs encoded in protein sequences | 2004 | Via, Allegra; M., Helmer Citterich | |
| A structure filter for the Eukaryotic Linear Motif Resource | 2009 | Via, Allegra; Cathryn M., Gould; Christine, Gemund; Toby J., Gibson; Manuela Helmer, Citterich | |
| AI applications in functional genomics | 2021 | Caudai, Claudia; Galizia, Antonella; Geraci, Filippo; Le Pera, Loredana; Morea, Veronica; Salerno, Emanuele; Via, Allegra; Colombo, Teresa | |
| Analysis of point mutations leading to antibiotic resistance in Streptococcus pneumoniae | 2018 | Staid, DAVID SASAH; Gerda, Užubalytė; Via, Allegra | |
| Artemether resistance in vitro is linked to mutations in PfATP6 in travellers returning with Plasmodium falciparum infections. | 2012 | D. R., Pillai; R., Lau; K., Khairnar; Lepore, Rosalba; Via, Allegra; H. M., Staines; S., Krishna | |
| Best practices in bioinformatics training for life scientists | 2013 | Via, Allegra; Blicher, T; Bongcam Rudloff, E; Brazas, Md; Brooksbank, C; Budd, A; De Las Rivas, J; Dreyer, J; Fernandes, Pl; van Gelder, C; Jacob, J; Jimenez, Rc; Loveland, J; Moran, F; Mulder, N; Nyrönen, T; Rother, K; Schneider, Mv; Attwood, Tk | |
| Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers | 2012 | M. V., Schneider; P., Walter; M. C., Blatter; J., Watson; M. D., Brazas; K., Rother; A., Budd; Via, Allegra; C. W. G., Van Gelder; J., Jacob; P., Fernandes; T. H., Nyronen; J., De Las Rivas; T., Blicher; R. C., Jimenez; J., Loveland; J., Mcdowall; P., Jones; B. W., Vaughan; R., Lopez; T. K., Attwood; C., Brooksbank | |
| Bioinformatics training: A review of challenges, actions and support requirements | 2010 | M. V., Schneider; J., Watson; T., Attwood; K., Rother; A., Budd; J., Mcdowall; Via, Allegra; P., Fernandes; T., Nyronen; T., Blicher; P., Jones; M. C., Blatter; J., De Las Rivas; D. P., Judge; W., Van Der Gool; C., Brooksbank | |
| Characterization of the differences in the cyclopiazonic acid binding mode to mammalian and P. Falciparum Ca2+ pumps: a computational study | 2015 | Di Marino, Daniele; D'Annessa, Ilda; Coletta, Andrea; Via, Allegra; Tramontano, Anna | |
| Course design: considerations for trainers – a professional guide | 2020 | Via, Allegra; Palagi, Patricia M.; Lindvall, Jessica M.; Tractenberg, Rochelle E.; Attwood, Teresa K.; GOBLET Foundation, The | |
| Data integration in biological research: An overview | 2015 | Lapatas, Vasileios; Stefanidakis, Michalis; Jimenez, Rafael C.; Via, Allegra; Schneider, Maria Victoria | |
| Development of computational tools for the inference of protein interaction specificity rules and functional annotation using structural information. | 2003 | Ferre, F; Via, Allegra; Ausiello, G; Brannetti, B; Zanzoni, A.; HELMER CITTERICH, M. | |
| Digestive peptidase evolution in holometabolous insects led to a divergent group of enzymes in Lepidoptera | 2015 | Dias, Renata O; Via, Allegra; Brandão, Marcelo M; Tramontano, Anna; Silva-Filho, Marcio C |