NARDI, ALESSANDRO NICOLA
NARDI, ALESSANDRO NICOLA
DIPARTIMENTO DI CHIMICA
A finely balanced order–disorder equilibrium sculpts the folding–binding landscape of an antibiotic sequestering protein
2024 Natarajan, Lawanya; De Sciscio, Maria Laura; Nardi, Alessandro Nicola; Sekhar, Ashok; Del Giudice, Alessandra; D'Abramo, Marco; Naganathan, Athi N.
A study of cyanidin/alginate complexation: influence of pH in assembly and chiral properties
2023 Chotechuang, Nattida; Di Gianvincenzo, Paolo; Chen, CHENG GIUSEPPE; Nardi, Alessandro Nicola; Padró, Daniel; Boonla, Chanchai; Ortore, Maria Grazia; D' Abramo, Marco; Moya, Sergio E
A Theoretical‐Computational Study of Phosphodiester Bond Cleavage Kinetics as a Function of the Temperature
2024 Nardi, Alessandro Nicola; Olivieri, Alessio; D'Abramo, Marco; Amadei, Andrea
Absorption behavior of doxorubicin hydrochloride in visible region in different environments: a combined experimental and computational study
2022 Chen, C. G.; Nardi, A. N.; Giustini, M.; D'Abramo, M.
Complexation and organization of doxorubicin on polystyrene sulfonate chains: impacts on doxorubicin dimerization and quenching
2022 Gjerde, Natalie Solfrid; Nardi, Alessandro Nicola; Chen, CHENG GIUSEPPE; Di Gianvincenzo, Paolo; D'Abramo, Marco; Scipioni, Anita; Galantini, Luciano; Moya, Sergio E; Giustini, Mauro
Effect of salts on the conformational dynamics of the Cytochrome P450 OleP
2023 De Sciscio, Maria Laura; Nardi, Alessandro Nicola; Parisi, Giacomo; Bulfaro, Giovanni; Costanzo, Antonella; Gugole, Elena; Exertier, Cécile; Freda, Ida; Savino, Carmelinda; Vallone, Beatrice; Montemiglio, Linda Celeste; D’Abramo, Marco
Modeling Charge Transfer Reactions by Hopping between Electronic Ground State Minima: Application to Hole Transfer between DNA Bases
2022 Nardi, Alessandro Nicola; D'Abramo, Marco; Amadei, Andrea
Modelling Complex Bimolecular Reactions in a Condensed Phase: The Case of Phosphodiester Hydrolysis
2023 Nardi, A. N.; Olivieri, A.; Amadei, A.; Salvio, R.; D'Abramo, M.
Molecular Modeling of the Deamidation Reaction in Solution: A Theoretical-Computational Study
2023 De Sciscio, Maria Laura; Nardi, Alessandro Nicola; Centola, Fabio; Rossi, Mara; Guarnera, Enrico; D'Abramo, Marco
Point mutations at a key site alter the cytochrome P450 oleP structural dynamics
2022 Montemiglio, L. C.; Gugole, E.; Freda, I.; Exertier, C.; D'Auria, L.; Chen, C. G.; Nardi, A. N.; Cerutti, G.; Parisi, G.; D'Abramo, M.; Savino, C.; Vallone, B.
PyMM: an open-source python program for QM/MM simulations based on the perturbed matrix method
2022 Chen, CHENG GIUSEPPE; Nardi, ALESSANDRO NICOLA; Amadei, Andrea; D’Abramo, Marco
Rationalizing Sequence and Conformational Effects on the Guanine Oxidation in Different DNA Conformations
2022 Nardi, Alessandro Nicola; Olivieri, Alessio; D'Abramo, Marco
Supramolecular citrate poly allylamine hydrochloride nanoparticles for citrate delivery and calcium oxalate nanocrystal dissolution
2024 Gianvincenzo, Paolo Di; Leyes, Marcos Fernandez; Boonkam, Kamonchat; Puentes, Alejandro Fábrega; Reyes, Santiago Gimenez; Nardi, Alessandro Nicola; Olivieri, Alessio; Pummarin, Siwanut; Kamonsutthipaijit, Nuntaporn; Amenitsch, Heinz; Ritacco, Hernan; D'Abramo, Marco; Ortore, Maria Grazia; Boonla, Chanchai; Moya, Sergio E.
Theoretical characterization of the reduction potentials of nucleic acids in solution
2021 D'Annibale, V.; Nardi, A. N.; Amadei, A.; D'Abramo, M.
Theoretical Insights into MutY Glycosylase DNA Repair Mechanism
2024 Olivieri, Alessio; Nardi, Alessandro Nicola; D'Abramo, Marco
Theoretical modeling of redox potentials of biomolecules
2022 Chen, C. G.; Nardi, A. N.; Amadei, A.; D'Abramo, M.
Unveiling the Cleavage Mechanism of an RNA Model Compound on the whole pH Scale: Computations Meet Experiments in the Determination of Reaction Rates
2024 Nardi, Alessandro Nicola; Olivieri, Alessio; D'Abramo, Marco; Salvio, Riccardo
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A finely balanced order–disorder equilibrium sculpts the folding–binding landscape of an antibiotic sequestering protein | 2024 | Natarajan, Lawanya; De Sciscio, Maria Laura; Nardi, Alessandro Nicola; Sekhar, Ashok; Del Giudice, Alessandra; D'Abramo, Marco; Naganathan, Athi N. | |
| A study of cyanidin/alginate complexation: influence of pH in assembly and chiral properties | 2023 | Chotechuang, Nattida; Di Gianvincenzo, Paolo; Chen, CHENG GIUSEPPE; Nardi, Alessandro Nicola; Padró, Daniel; Boonla, Chanchai; Ortore, Maria Grazia; D' Abramo, Marco; Moya, Sergio E | |
| A Theoretical‐Computational Study of Phosphodiester Bond Cleavage Kinetics as a Function of the Temperature | 2024 | Nardi, Alessandro Nicola; Olivieri, Alessio; D'Abramo, Marco; Amadei, Andrea | |
| Absorption behavior of doxorubicin hydrochloride in visible region in different environments: a combined experimental and computational study | 2022 | Chen, C. G.; Nardi, A. N.; Giustini, M.; D'Abramo, M. | |
| Complexation and organization of doxorubicin on polystyrene sulfonate chains: impacts on doxorubicin dimerization and quenching | 2022 | Gjerde, Natalie Solfrid; Nardi, Alessandro Nicola; Chen, CHENG GIUSEPPE; Di Gianvincenzo, Paolo; D'Abramo, Marco; Scipioni, Anita; Galantini, Luciano; Moya, Sergio E; Giustini, Mauro | |
| Effect of salts on the conformational dynamics of the Cytochrome P450 OleP | 2023 | De Sciscio, Maria Laura; Nardi, Alessandro Nicola; Parisi, Giacomo; Bulfaro, Giovanni; Costanzo, Antonella; Gugole, Elena; Exertier, Cécile; Freda, Ida; Savino, Carmelinda; Vallone, Beatrice; Montemiglio, Linda Celeste; D’Abramo, Marco | |
| Modeling Charge Transfer Reactions by Hopping between Electronic Ground State Minima: Application to Hole Transfer between DNA Bases | 2022 | Nardi, Alessandro Nicola; D'Abramo, Marco; Amadei, Andrea | |
| Modelling Complex Bimolecular Reactions in a Condensed Phase: The Case of Phosphodiester Hydrolysis | 2023 | Nardi, A. N.; Olivieri, A.; Amadei, A.; Salvio, R.; D'Abramo, M. | |
| Molecular Modeling of the Deamidation Reaction in Solution: A Theoretical-Computational Study | 2023 | De Sciscio, Maria Laura; Nardi, Alessandro Nicola; Centola, Fabio; Rossi, Mara; Guarnera, Enrico; D'Abramo, Marco | |
| Point mutations at a key site alter the cytochrome P450 oleP structural dynamics | 2022 | Montemiglio, L. C.; Gugole, E.; Freda, I.; Exertier, C.; D'Auria, L.; Chen, C. G.; Nardi, A. N.; Cerutti, G.; Parisi, G.; D'Abramo, M.; Savino, C.; Vallone, B. | |
| PyMM: an open-source python program for QM/MM simulations based on the perturbed matrix method | 2022 | Chen, CHENG GIUSEPPE; Nardi, ALESSANDRO NICOLA; Amadei, Andrea; D’Abramo, Marco | |
| Rationalizing Sequence and Conformational Effects on the Guanine Oxidation in Different DNA Conformations | 2022 | Nardi, Alessandro Nicola; Olivieri, Alessio; D'Abramo, Marco | |
| Supramolecular citrate poly allylamine hydrochloride nanoparticles for citrate delivery and calcium oxalate nanocrystal dissolution | 2024 | Gianvincenzo, Paolo Di; Leyes, Marcos Fernandez; Boonkam, Kamonchat; Puentes, Alejandro Fábrega; Reyes, Santiago Gimenez; Nardi, Alessandro Nicola; Olivieri, Alessio; Pummarin, Siwanut; Kamonsutthipaijit, Nuntaporn; Amenitsch, Heinz; Ritacco, Hernan; D'Abramo, Marco; Ortore, Maria Grazia; Boonla, Chanchai; Moya, Sergio E. | |
| Theoretical characterization of the reduction potentials of nucleic acids in solution | 2021 | D'Annibale, V.; Nardi, A. N.; Amadei, A.; D'Abramo, M. | |
| Theoretical Insights into MutY Glycosylase DNA Repair Mechanism | 2024 | Olivieri, Alessio; Nardi, Alessandro Nicola; D'Abramo, Marco | |
| Theoretical modeling of redox potentials of biomolecules | 2022 | Chen, C. G.; Nardi, A. N.; Amadei, A.; D'Abramo, M. | |
| Unveiling the Cleavage Mechanism of an RNA Model Compound on the whole pH Scale: Computations Meet Experiments in the Determination of Reaction Rates | 2024 | Nardi, Alessandro Nicola; Olivieri, Alessio; D'Abramo, Marco; Salvio, Riccardo |